debug

Investigation-first debugging. Gather evidence, trace data flow, form confirmed root-cause hypothesis, hand off to fix mode.

NOT for: production incidents without any CI run ID or local traceback (use /foundry:investigate (requires foundry plugin) for triage); .claude/ config issues (use /foundry:audit (requires foundry plugin)); non-Python projects (JS/TS/Go/Rust) — toolchain assumes pytest; use language-native toolchain instead. CI-only failures ARE supported — pass --ci-run <run-id or URL> to use GitHub Actions logs as evidence source.

Issue ID routing note: issue mode selected when --issue flag present, or when argument (after other flags stripped) is a pure run of digits with an optional # prefix (e.g. 123 or #123). No numeric threshold. Pass --issue <N> to force issue mode for any argument.

Key boundary: after Steps 1+2 — evidence gathered and pattern analysis complete, before hypothesis gate (Step 3). Preserve: debug mode, CI run ID if set, evidence signals (issue body, test path), tried-hypotheses ledger (candidate causes + verdicts — refuted/ruled-out/open), --keep items. Refresh also after any Step 3 probe that rules out a hypothesis — so post-compact gate does not re-test refuted causes (loop guard).

Agent Resolution

_DEV_SHARED=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/dev_shared_resolve.py" 2>/dev/null)  # timeout: 5000
# loads: compaction-contract.md
cat "$_DEV_SHARED/agent-resolution.md"

Contains: foundry check + fallback table. If foundry not installed: substitute each foundry:X with general-purpose per table. Agents this skill uses: foundry:sw-engineer, foundry:challenger.

_DEV_SHARED=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/dev_shared_resolve.py" 2>/dev/null)  # timeout: 5000
cat "$_DEV_SHARED/task-hygiene.md"

Project Detection

_DEV_SHARED=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/dev_shared_resolve.py" 2>/dev/null)  # timeout: 5000
cat "$_DEV_SHARED/runner-detection.md"

Sets $TEST_CMD (full suite) and $PYTEST_CMD (pytest flags). Run at skill start.

Language preflight gate: detect project language; adjust test runner accordingly.

# timeout: 5000
LANG_HINT="python"
if [ ! -f "pyproject.toml" ] && [ ! -f "setup.py" ] && [ ! -f "setup.cfg" ] && [ ! -f "Pipfile" ]; then
    if [ -f "package.json" ]; then LANG_HINT="node"
    elif [ -f "go.mod" ]; then LANG_HINT="go"
    elif [ -f "Cargo.toml" ]; then LANG_HINT="rust"
    fi
fi

If LANG_HINT not python: invoke AskUserQuestion — "Non-Python project detected ($LANG_HINT). Toolchain assumes pytest. How to proceed?" · (a) Abort — use language-native runner · (b) Continue — repo also has Python sources. On Abort: stop.

Checkpoint: debug = investigation only — no code changes. .plans/active/debug_<slug>.md (written in Step 4) serves as implicit session state. No .developments/ checkpoint needed.

Flag parsing

Parse flags into actual shell variables (not prose) so downstream blocks see correct values:

export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
KEEP_ITEMS=""
if [[ "$ARGUMENTS" =~ --keep[[:space:]]\"([^\"]+)\" ]]; then
    KEEP_ITEMS="${BASH_REMATCH[1]}"
fi
echo "$KEEP_ITEMS" > "${TMPDIR:-/tmp}/dev-debug-keep-items-${CSID}"
rm -f .temp/state/skill-contract.md ${TMPDIR:-/tmp}/dev-debug-hypotheses-${CSID}  # timeout: 5000

# timeout: 10000
python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/dev_parse_args.py" \
    --skill debug --write-files "$ARGUMENTS"
# URL normalization + log fetching: §URL Normalization in ci-log-extract.md

Worktree isolation

loads: worktree-isolation.md

When --worktree set, run the investigation in an isolated git worktree so reproduction attempts (repro scripts, temp edits) can never mutate the main sources — before codemap detection or Step 1.

# timeout: 5000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
IFS= read -r WORKTREE_ENABLED < "${TMPDIR:-/tmp}/dev-debug-worktree-${CSID}" 2>/dev/null; [ "$WORKTREE_ENABLED" = "true" ] || WORKTREE_ENABLED=false

_DEV_SHARED=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/dev_shared_resolve.py" 2>/dev/null)  # timeout: 5000
cat "$_DEV_SHARED/worktree-isolation.md"

WORKTREE_ENABLED=true → follow §Enter (base off HEAD, EnterWorktree(path=…)). Read-only skill — obey §Deliverable: the diagnosis file is written to the main tree ($_ORIG_ROOT) at Step 4 so /develop:fix can read it. Else skip — run in main tree.

Codemap resolve — CODEMAP_RAW already written to ${TMPDIR:-/tmp}/dev-debug-codemap-${CSID} (per-skill) and ${TMPDIR:-/tmp}/dev-codemap-raw-${CSID} (legacy) by flag-parsing block above (via dev_parse_args.py --skill debug --write-files). Read per-skill path, then normalize via codemap-resolve:

# timeout: 5000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
IFS= read -r CODEMAP_RAW < "${TMPDIR:-/tmp}/dev-debug-codemap-${CSID}" 2>/dev/null || CODEMAP_RAW="auto"
CODEMAP_ENABLED=$("${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/codemap-resolve" "$CODEMAP_RAW")
RESOLVE_EXIT=$?
if [ "$RESOLVE_EXIT" -ne 0 ]; then
    if [ "$CODEMAP_RAW" = "strict" ]; then
        echo "! BLOCKED — codemap unavailable but --codemap (strict) passed; run /codemap-py:scan-codebase or install codemap plugin"
        exit 1
    fi
    CODEMAP_ENABLED=false
fi
# skill-specific path — avoids stale value from prior feature --codemap run
echo "$CODEMAP_ENABLED" > ${TMPDIR:-/tmp}/dev-debug-codemap-enabled-${CSID}

loads: codemap-gates.md

_DEV_SHARED=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/dev_shared_resolve.py" 2>/dev/null)  # timeout: 5000
cat "$_DEV_SHARED/codemap-gates.md"

Follow Gate A and Gate B.

Downstream blocks read back: IFS= read -r CHALLENGE_ENABLED < "${TMPDIR:-/tmp}/dev-challenge-enabled-${CSID}" 2>/dev/null || CHALLENGE_ENABLED=true, IFS= read -r CHALLENGE_FORCED < "${TMPDIR:-/tmp}/dev-challenge-forced-${CSID}" 2>/dev/null || CHALLENGE_FORCED=false, IFS= read -r TEAM_MODE < "${TMPDIR:-/tmp}/dev-team-mode-${CSID}" 2>/dev/null || TEAM_MODE=false, IFS= read -r CI_RUN_ID < "${TMPDIR:-/tmp}/dev-ci-run-id-${CSID}" 2>/dev/null || CI_RUN_ID="".

_DEV_SHARED=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/dev_shared_resolve.py" 2>/dev/null)  # timeout: 5000
cat "$_DEV_SHARED/ci-log-extract.md"

Follow §URL Normalization to set CI_RUN_ID. If CI_RUN_ID set, follow §Log Fetching and §Log Parsing to set CI_LOG_EVIDENCE; use it as evidence source in Step 1 instead of local pytest.

Unsupported flag check — after ALL supported flags extracted (including --issue and --keep from blocks above), scan $ARGUMENTS for remaining --<token> tokens not in supported list. Do NOT include --issue or --keep in "unknown" set — both are consumed by the mode-detect and keep-parse blocks above. Supported: --no-challenge, --challenge, --team, --worktree, --ci-run, --issue, --repo, --codemap, --no-codemap, --keep. If truly unknown token found: print ! Unknown flag(s): \--`.then invokeAskUserQuestion` — (a) Abort (stop, re-invoke with correct flags) · (b) Continue ignoring (skip unknown flags, proceed). On Abort: stop.

Mode selection — debug runs in one of two mutually-exclusive modes; set explicitly before any Step:

# timeout: 5000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
# strip flags first — "123 --no-challenge" would fail integer detection otherwise
ARGUMENTS_FOR_MODE_DETECT=$(echo "$ARGUMENTS" | sed -E 's/--no-challenge|--challenge|--team|--worktree|--ci-run[= ]?[^ ]+|--issue|--repo[= ]?[^ ]+|--no-codemap|--codemap|--keep +"[^"]+"//g' | xargs)
if [[ " $ARGUMENTS " == *" --issue "* ]] || [[ "$ARGUMENTS_FOR_MODE_DETECT" =~ ^#?[0-9]+$ ]]; then
    DEBUG_MODE="issue"
else
    DEBUG_MODE="symptom"
fi
echo "$DEBUG_MODE" > ${TMPDIR:-/tmp}/dev-debug-mode-${CSID}

Subsequent steps branch by DEBUG_MODE:

• Issue mode: Step 1 fetches issue body and extracts test path before invoking pytest; skip symptom-text pytest block. Stop after Step 4 (handoff) — do not run symptom-text branches.
• Symptom mode: Step 1 skips issue fetch; uses free-text symptom directly. Skip issue-mode pytest block entirely.

If TEAM_MODE=true — execute team investigation now in place of standard Steps 1-2. After team synthesis completes, run Steps 3-4 inline (hypothesis gate + handoff to fix) on winning hypothesis — do not return to standard Steps 1-2. Authoritative reading: team mode replaces Steps 1-2 (parallel hypothesis investigation supplants serial evidence gathering); Steps 3-4 still execute (inline within this block, not by looping back to standard workflow):

1. _DEV_SHARED=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/dev_shared_resolve.py" 2>/dev/null); cat "$_DEV_SHARED/preflight-helpers.md" §Team Spawn Template. Confirm [ROLE_PHRASE] = symptom text (from $ARGUMENTS stripped of flags), [FILE_SLUG] = debug-hypothesis.
2. Run project detection (_DEV_SHARED=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/dev_shared_resolve.py" 2>/dev/null); cat "$_DEV_SHARED/runner-detection.md") to set $TEST_CMD and $PYTEST_CMD.
3. Compute TS=$(date -u +%Y-%m-%dT%H-%M-%SZ) and mkdir -p ".temp/develop/$TS". Spawn 2-3 foundry:sw-engineer agents (model=opus) in parallel — each investigating one independent root-cause hypothesis. Use Team Spawn Template from preflight-helpers: replace [ROLE_PHRASE] with symptom, [FILE_SLUG] with debug-hypothesis, assign each agent a distinct hypothesis number N. Each agent writes full output to .temp/develop/$TS/debug-hypothesis-N.md and returns compact JSON {"status":"done","file":"<path>","findings":N,"confidence":0.N,"summary":"<one-line description of hypothesis>"}.
4. Coordination: lead broadcasts {symptom: <description>, traceback: <key lines>} to teammates before spawning. After all return, facilitate cross-challenge between competing analyses. Convergence rule: select hypothesis with most direct evidence (observable in code or logs); if truly tied, invoke AskUserQuestion presenting top 2 competing hypotheses.
5. Synthesis trace agent: spawn one foundry:sw-engineer synthesis agent after individual teammate reports — read all teammate findings from .temp/develop/$TS/debug-hypothesis-*.md, produce unified cross-cutting trace map (entry point, modules crossed, state mutations, invariant violations across hypotheses). Write to .temp/develop/$TS/debug-trace-synthesis.md.
6. Lead synthesises consensus root cause from synthesis trace + competing hypotheses. Run Steps 3-4 of standard workflow (hypothesis gate + hand off to fix) on winning hypothesis — execute those steps inline here; do not loop back through Steps 1-2. Step 3 gate in team mode: if convergence reached by synthesis agent (all hypotheses point to same root cause with high confidence), present converged hypothesis without a new user confirmation prompt — state "Team converged on root cause (no ambiguity)" and proceed directly to Step 4 handoff. Only invoke AskUserQuestion at Step 3 if competing hypotheses remain or convergence declared by default (tied evidence).

Health monitoring (CLAUDE.md §6): for each spawned agent, use a per-agent sentinel keyed on loop counter $N (not literal N). Loop over agent indices in actual bash:

# timeout: 5000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
for N in 1 2 3; do
    touch "${TMPDIR:-/tmp}/debug-team-check-${N}-${CSID}"
done

Poll each independently every 5 min via find .temp/develop/$TS -newer ${TMPDIR:-/tmp}/debug-team-check-${N}-${CSID} -type f | wc -l where $N is actual agent index in loop variable. A single shared sentinel collapses health isolation — stalled agent N=2 cannot be distinguished from active agent N=1. Hard cutoff 15 min no-file-activity per agent; mark timed-out agents with ⏱ in synthesis.

Step 1: Understand the symptom

Collect all signals before forming any hypothesis.

Structural context (codemap-py — only if CODEMAP_ENABLED=true): if index available, run before codebase exploration to pre-load blast-radius context for failing module:

# timeout: 10000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
IFS= read -r CODEMAP_ENABLED < "${TMPDIR:-/tmp}/dev-debug-codemap-enabled-${CSID}" 2>/dev/null || CODEMAP_ENABLED="false"
if [ "$CODEMAP_ENABLED" = "true" ]; then
    codemap-py query central --top 5 2>/dev/null
fi

After reading traceback or $ARGUMENTS, derive TARGET_MODULE: strip src/, .py suffix, replace / with . (e.g. src/mypackage/auth.py → mypackage.auth); capture the failing function name too, if known, as FAILING_FN. TARGET_MODULE is a substitution token — resolve into the shell variable before the block below. Do NOT execute with literal <TARGET_MODULE> — bash would interpret < as stdin redirect:

# Resolve TARGET_MODULE (and FAILING_FN if known) before this block — e.g.:
# TARGET_MODULE=mypackage.auth ; FAILING_FN=validate
# timeout: 10000
if [ -z "$TARGET_MODULE" ]; then
    echo "⚠ TARGET_MODULE not resolved — skipping codemap rdeps/fn-blast query"
else
    codemap-py query rdeps "$TARGET_MODULE" 2>/dev/null
    [ -n "$FAILING_FN" ] && codemap-py query fn-blast "$TARGET_MODULE::$FAILING_FN" 2>/dev/null  # v3 index only
fi

If codemap-py results returned: prepend ## Structural Context (codemap-py) block to foundry:sw-engineer spawn prompt (Step 1). Callers of failing module = likely affected paths to verify after fix. fn-blast shows transitive callers — high-depth callers are regression risk.

Issue-number mode first — if $ARGUMENTS is issue number, fetch issue body and extract test path BEFORE invoking pytest:

# timeout: 6000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
IFS= read -r REPO_NAME < "${TMPDIR:-/tmp}/dev-upstream-${CSID}" 2>/dev/null || REPO_NAME=""
if [ -n "$REPO_NAME" ]; then
    ISSUE_BODY=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/issue_fetch.py" "$ARGUMENTS" --repo "$REPO_NAME" 2>/dev/null)
else
    ISSUE_BODY=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/issue_fetch.py" "$ARGUMENTS" 2>/dev/null)
fi
echo "$ISSUE_BODY" | tee ${TMPDIR:-/tmp}/dev-issue-body-${CSID}   # persist — reloaded in next block (bash state lost between Bash() calls; re-fetching would duplicate the gh call)

# timeout: 5000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
# grep the file directly — `IFS= read -r ISSUE_BODY` would capture only the FIRST line of a multi-line issue body
TEST_PATH=$(grep -oE '(tests?/[^[:space:]]+\.py|test_[^[:space:]]+\.py)' "${TMPDIR:-/tmp}/dev-issue-body-${CSID}" 2>/dev/null | head -1)
if [ -z "$TEST_PATH" ]; then
  echo "→ No test file found in issue; running full test suite"
elif [ ! -f "$TEST_PATH" ]; then
  echo "⚠ test path from issue not found on disk: $TEST_PATH — running full suite"
  TEST_PATH=""
fi
echo "$TEST_PATH" > "${TMPDIR:-/tmp}/dev-debug-test-path-${CSID}"  # persist — three later blocks consume it

Run pytest with extracted path (empty $TEST_PATH → full suite). $TEST_PATH stays unquoted so an empty value collapses to no argument rather than an empty one:

# timeout: 600000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
IFS= read -r PYTEST_CMD < "${TMPDIR:-/tmp}/dev-pytest-cmd-${CSID}" 2>/dev/null || PYTEST_CMD=""
IFS= read -r TEST_PATH  < "${TMPDIR:-/tmp}/dev-debug-test-path-${CSID}" 2>/dev/null || TEST_PATH=""
if [ -z "$PYTEST_CMD" ]; then
    echo "! PYTEST_CMD unresolved — re-run §Project Detection (runner-detection.md); an empty command would exit 127 and be misread as a reproduced bug"
else
    $PYTEST_CMD --tb=long ${TEST_PATH} -v 2>&1 | tail -60
    GATE_EXIT=${PIPESTATUS[0]}
    echo "$GATE_EXIT" > "${TMPDIR:-/tmp}/dev-gate-exit-${CSID}"
    if [ "$GATE_EXIT" -ne 0 ]; then
        echo "Bug reproduced — tests fail. Proceed to fix."
    else
        echo "Tests pass — bug may not be reproducible via pytest; check symptom directly."
    fi
fi

# timeout: 3000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
IFS= read -r TEST_PATH < "${TMPDIR:-/tmp}/dev-debug-test-path-${CSID}" 2>/dev/null || TEST_PATH=""
git log --oneline -20
COMMIT_COUNT=$(git rev-list --count HEAD 2>/dev/null || echo 1)
LOOKBACK=$(( COMMIT_COUNT < 5 ? COMMIT_COUNT : 5 ))
if [ "$LOOKBACK" -gt 1 ]; then
    # git rejects an empty pathspec (fatal, exit 128) — omit the `--` clause entirely for the full-repo diff
    if [ -n "$TEST_PATH" ]; then
        git diff "HEAD~${LOOKBACK}..HEAD" -- "$TEST_PATH"
    else
        git diff "HEAD~${LOOKBACK}..HEAD"
    fi
fi

Cross-repo adaptation (when REPO_NAME set) — issue from different codebase. After fetching issue:

1. Extract bug's root cause intent — what invariant violated, not just described symptoms (which may reference upstream structure or code paths)
2. Search LOCAL codebase for equivalent failure site — grep for related symbols; code paths may differ from upstream due to divergence
3. Treat upstream issue as debugging context, not as a map — trace actual failure in local code

Symptom-text mode — if $ARGUMENTS is free-text, skip issue fetch + extraction; locate failing test path from symptom directly. <test_path> is a substitution token — resolve into shell variable $TEST_PATH first (via Grep against symptom keywords or heuristic file search), then use $TEST_PATH in pytest call. Do NOT execute with literal <test_path> string — bash would interpret < as stdin redirect from a file named test_path:

# timeout: 600000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
IFS= read -r PYTEST_CMD < "${TMPDIR:-/tmp}/dev-pytest-cmd-${CSID}" 2>/dev/null || PYTEST_CMD=""
TEST_PATH=""   # REPLACE with the resolved failing test path, e.g. $(grep -rlE '<symptom keyword>' tests/ --include='*.py' | head -1); empty → full suite
echo "$TEST_PATH" > "${TMPDIR:-/tmp}/dev-debug-test-path-${CSID}"  # persist — later blocks consume it
if [ -z "$PYTEST_CMD" ]; then
    echo "! PYTEST_CMD unresolved — re-run §Project Detection (runner-detection.md); an empty command would exit 127 and be misread as a reproduced bug"
else
    $PYTEST_CMD --tb=long ${TEST_PATH} -v 2>&1 | tail -60
    GATE_EXIT=${PIPESTATUS[0]}
    echo "$GATE_EXIT" > "${TMPDIR:-/tmp}/dev-gate-exit-${CSID}"
    if [ "$GATE_EXIT" -ne 0 ]; then
        echo "Bug reproduced — tests fail. Proceed to fix."
    else
        echo "Tests pass — bug may not be reproducible via pytest; check symptom directly."
    fi
fi

Claim-validation gate — before debugging, validate that user's expectation is itself correct. A bug report always contains an implicit or explicit claim: "X should behave like Y". Claim may be wrong — misread docs, misunderstood API contract, incorrect formula, outdated assumption. Fixing a correct implementation to match a wrong expectation wastes effort and introduces regressions.

Classify claim type and validate accordingly:

Resolution rules:

1. Claim verifiable from docs/type hints/tests → read source now; confirm before proceeding
2. Claim verifiable by quick computation → run inline script to compute expected value independently
3. Domain-specific claim requiring literature → spawn research:scientist; if plugin absent flag: ⚠ Expected value unverified — treating as assumption
4. Claim contradicts docs/contract → it is a documentation misunderstanding, not a bug; surface this to user before any code change
5. Gate: do not form root-cause hypothesis until claimed expectation confirmed or explicitly flagged as unverified; wrong expectation → wrong fix

Use Grep (pattern: failing symbol, class, or error keyword) to trace call path from entry point to failure site. Path hint: use src/ if exists, else search from project root (.).

Spawn foundry:sw-engineer agent to map execution path and produce:

• Entry point to failure: which modules does call cross?
• What state mutated along the way?
• What invariant violated at failure point?
• Any recent commit touching this path (from git log output)

Scope gate: if root cause spans 3+ modules, flag complexity smell. Use AskUserQuestion to present scope concern before proceeding, with options: "Narrow scope (Recommended)" / "Proceed anyway".

Present agent's analysis summary before proceeding.

Flaky-test branch — if symptom is intermittent (passes alone, fails in full suite): run binary-search isolation. <failing-test-node-id> is a substitution token — before executing this block, resolve failing test node ID from $ARGUMENTS or from prior pytest output (captured in a shell variable, e.g. FAILING_TEST_NODE=tests/foo.py::test_bar), then substitute literal node ID into command. Do NOT execute with literal <failing-test-node-id> string — bash would interpret < as stdin redirect:

# resolve FAILING_TEST_NODE first — bash interprets literal <...> as redirect:
# FAILING_TEST_NODE=$(echo "$ARGUMENTS" | grep -oE 'tests?/[^[:space:]]+::test_[^[:space:]]+' | head -1)
_FOUNDRY_SHARED=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/dev_shared_resolve.py" --foundry 2>/dev/null | tail -1)   # --foundry emits foundry's skills/_shared on line 2 (no --foundry-bin flag exists)
_FOUNDRY_BIN="${_FOUNDRY_SHARED%/skills/_shared}/bin"
[ -d "$_FOUNDRY_BIN" ] || _FOUNDRY_BIN=$(ls -td ~/.claude/plugins/cache/*/foundry/*/bin 2>/dev/null | head -1 || echo "${CLAUDE_PLUGIN_ROOT:-plugins/cc_foundry}/bin")  # timeout: 5000
if [ -z "$FAILING_TEST_NODE" ]; then
    echo "⚠ FAILING_TEST_NODE not resolved — cannot run polluter isolation; surface failing test node ID first"
elif [ -f "$_FOUNDRY_BIN/find-polluter.py" ]; then
    python "$_FOUNDRY_BIN/find-polluter.py" "$FAILING_TEST_NODE"  # timeout: 60000
else
    echo "⚠ foundry plugin absent — skipping flaky-test isolation; proceed with standard rerun"
fi

Output names polluting upstream test. Cross-plugin call — find-polluter.py ships in foundry/bin/. Run only when CI shows non-deterministic failure pattern. If foundry plugin absent: skip flaky-test isolation step; proceed with standard rerun.

Step 2: Pattern analysis

Find nearest similar working code path, compare exhaustively:

1. Locate 2-3 code paths handling similar input or similar work successfully
2. List every difference between working path and broken one — not just obvious one
3. Check across axes:
   • Same input, different environment (versions, config, data shape)?
   • Same logic, different call order or timing?
   • Conditionals taking different branches on different inputs?
   • None/empty guards present in working path but absent in broken one?

Step catches non-obvious causes — ordering dependency, environment-specific state, type coercion silently changing behaviour.

Record candidates (loop guard) — as each candidate cause identified, append it to hypothesis ledger with verdict open. Ledger inlined into compaction contract at boundary below, so a mid-investigation compaction never loses which causes were already weighed. Verdict values: open · refuted (challenger) · ruled-out (probe).

# WHY: ledger survives compaction via contract; prevents re-testing refuted causes after a mid-investigation compact
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
echo "<candidate cause> :: open" >> ${TMPDIR:-/tmp}/dev-debug-hypotheses-${CSID}

Challenger gate

Decision — three states (default is NOT "skip": it runs on substantial root causes and auto-skips only narrow ones):

1. --no-challenge (CHALLENGE_ENABLED=false) → skip gate entirely, any size.
2. else --challenge (IFS= read -r CHALLENGE_FORCED < "${TMPDIR:-/tmp}/dev-challenge-forced-${CSID}" 2>/dev/null || CHALLENGE_FORCED=false = true) → always run, even on a narrow root cause.
3. else default → run when root cause is substantial (spans multiple files, a larger change, or touches public API); auto-skip when narrow (single file, ≲50 lines, no API change) — hypothesis simple enough to proceed directly.

Both flags exist because they cover opposite regimes: --no-challenge suppresses gate on substantial cases where it would otherwise fire; --challenge forces it on narrow cases where it would otherwise auto-skip.

Spawn foundry:challenger with pattern analysis from Step 2 (differences between working/broken paths, candidate causes):

"Review pattern analysis and candidate root causes. Challenge across all 5 dimensions: Assumptions, Missing Cases, Security Risks, Architectural Concerns, Complexity Creep. Apply mandatory refutation step."

Parse result — update hypothesis ledger (${TMPDIR:-/tmp}/dev-debug-hypotheses-${CSID}) with each candidate's verdict as you parse:

• Blockers found → STOP. Present findings. Incorporate challenger's surviving challenges into hypothesis list before Step 3 gate. Mark any candidate the challenger refuted :: refuted (challenger) in ledger.
• Concerns only → add as alternative hypotheses in Step 3; append each new concern to ledger as :: open (alt); continue.
• No findings / all refuted → proceed.

# Compaction contract — boundary: after evidence+challenge, before hypothesis gate (compaction-contract.md §Lifecycle)
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
IFS= read -r _DEBUG_MODE < "${TMPDIR:-/tmp}/dev-debug-mode-${CSID}" 2>/dev/null || _DEBUG_MODE="symptom"
IFS= read -r _CI_RUN < "${TMPDIR:-/tmp}/dev-ci-run-id-${CSID}" 2>/dev/null || _CI_RUN=""
IFS= read -r _KEEP < "${TMPDIR:-/tmp}/dev-debug-keep-items-${CSID}" 2>/dev/null || _KEEP=""
_TRIED=$(head -6 "${TMPDIR:-/tmp}/dev-debug-hypotheses-${CSID}" 2>/dev/null)  # cap keeps contract ≤12 lines
_PRESERVE="mode=$_DEBUG_MODE, ci-run=${_CI_RUN:-none}"
[ -n "$_KEEP" ] && _PRESERVE="$_PRESERVE; user-keep: $_KEEP"
mkdir -p .temp/state  # timeout: 5000
{
    echo "## Active Skill Contract"
    echo "- skill: develop:debug · phase: hypothesis+handoff (after evidence gathered and pattern analysis)"
    echo "- run-dir: .plans/active/"
    echo "- preserve: $_PRESERVE"
    if [ -n "$_TRIED" ]; then
        echo "- tried (do NOT re-test refuted/ruled-out):"
        echo "$_TRIED" | sed 's/^/    - /'
    fi
    echo "- next: state hypothesis with evidence (Step 3) → confirm root cause → write diagnosis → handoff to /develop:fix. Skip any candidate marked refuted/ruled-out above."
} > .temp/state/skill-contract.md

Step 3: Hypothesis and gate

State root cause hypothesis explicitly before writing any code:

Root cause: <one sentence — what is wrong and why>
Evidence for: [signals that support this]
Evidence against: [anything that contradicts or remains unexplained]
Confidence: high / medium / low

_DEV_SHARED=$(python "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/bin/dev_shared_resolve.py" 2>/dev/null)  # timeout: 5000
cat "$_DEV_SHARED/premise-grounding.md"

§Premise Grounding Gate. Apply using debug context from Skill contexts table. Run before presenting hypothesis — any ungrounded premise in hypothesis produces a fix that addresses wrong mechanism.

Gate: present hypothesis to user, wait for confirmation or challenge before proceeding to Step 4. Wrong hypothesis produces fix that passes tests but doesn't resolve underlying problem.

If confidence low: propose targeted probe (minimal script, added log statement, single assertion) to gather missing signal — run before committing to fix. If a probe rules out current hypothesis, append <cause> :: ruled-out (probe) to ${TMPDIR:-/tmp}/dev-debug-hypotheses-${CSID} and re-run boundary contract block above before re-hypothesizing — keeps loop guard current so ruled-out cause not revisited.

Test impact (codemap-py) — hypothesis confirmed — root cause now names a suspect module (and often a function). Query affected test set once here so /develop:fix reuses it instead of re-querying. Gated on CODEMAP_ENABLED + codemap-py query availability (same gate as Step 1). SUSPECT is a substitution token — assign it in the block below as the confirmed hypothesis in dotted qname form: module.path::function (fn known) or bare module.path (module-level), same derivation as TARGET_MODULE (Step 1: strip src/, drop .py, / → .):

# timeout: 8000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
IFS= read -r CODEMAP_ENABLED < "${TMPDIR:-/tmp}/dev-debug-codemap-enabled-${CSID}" 2>/dev/null || CODEMAP_ENABLED="false"
SUSPECT=""  # set to confirmed Step 3 hypothesis as module.path::function (fn known) or bare module.path — same shape as TARGET_MODULE
if [ -z "$SUSPECT" ]; then
    echo "⚠ SUSPECT not resolved — skipping Test Impact query and section"
    rm -f ${TMPDIR:-/tmp}/dev-debug-test-impact-${CSID}
elif [ "$CODEMAP_ENABLED" = "true" ] && command -v codemap-py >/dev/null 2>&1; then
    codemap-py query test-impact "$SUSPECT" 2>/dev/null | tee ${TMPDIR:-/tmp}/dev-debug-test-impact-${CSID}
else
    rm -f ${TMPDIR:-/tmp}/dev-debug-test-impact-${CSID}  # no query — fix falls back to its own live query
fi

Captured JSON carries pytest_cmd, test_files, top-level stale, and index.not_covered. Written into diagnosis file (Step 4) under a marked section so fix can reuse a fresh result. Query returns "error" or empty → skip silently; fix re-queries.

Step 4: Hand off to fix

Root cause confirmed. Transition to fix mode with diagnosis as input — fix's Step 1 pre-answered.

# timeout: 5000
if [ ! -f "${CLAUDE_PLUGIN_ROOT:-plugins/cc_develop}/skills/fix/SKILL.md" ]; then
    echo "⚠ /develop:fix not found — partial install detected; diagnosis file will be written but handoff cannot be invoked automatically"
fi

Emit handoff block:

Root cause: <confirmed hypothesis from Step 3>
Suspect file(s): <files identified in Steps 1-2>
Evidence: <key signals that confirmed the hypothesis>

Write diagnosis to file before handing off — enables /develop:fix to skip Step 1 analysis via --diagnosis <path>:

export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
SLUG=$(echo "$ARGUMENTS" | tr ' ' '\n' | grep -v '^--' | grep -v '^[0-9]\+$' | head -4 | tr '\n' '-' | tr '[:upper:]' '[:lower:]' | tr -cd '[:alnum:]-' | sed 's/-$//'); [ -z "$SLUG" ] && SLUG="unnamed-$(date +%s)"
# grep -v strips bare numeric tokens (e.g. CI run IDs) — avoids filenames like debug_12345678.md
# Deliverable lands in the MAIN tree: in --worktree mode the orig-root sentinel (written at §Enter) points there so /develop:fix can read it; absent → $(pwd)  # worktree-isolation.md §Deliverable
IFS= read -r _DIAG_BASE < "${TMPDIR:-/tmp}/dev-debug-orig-root-${CSID}" 2>/dev/null || _DIAG_BASE="$(pwd)"
[ -n "$_DIAG_BASE" ] || _DIAG_BASE="$(pwd)"
DIAG_FILE="$_DIAG_BASE/.plans/active/debug_${SLUG}.md"
mkdir -p "$_DIAG_BASE/.plans/active"

Write $DIAG_FILE with this structure:

# Debug Diagnosis: <symptom>

## Root Cause
<one sentence — confirmed hypothesis>

## Suspect Files
- path/to/file.py — <reason>

## Evidence
- <signal 1 that confirmed hypothesis>
- <signal 2>

## Confidence
<high|medium|low>

Append Test Impact section — only when Step 3 captured a non-empty, non-error result (${TMPDIR:-/tmp}/dev-debug-test-impact-${CSID} present). fix reads this to skip re-querying. Records raw JSON plus index scanned_at so fix can verify handoff is not older than current index (freshness guard):

# timeout: 5000
export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
TI_FILE="${TMPDIR:-/tmp}/dev-debug-test-impact-${CSID}"
if [ -s "$TI_FILE" ] && ! grep -q '"error"' "$TI_FILE"; then
    PROJ=$(basename "$(git rev-parse --show-toplevel 2>/dev/null)" 2>/dev/null || basename "$PWD")
    _IDX="${CODEMAP_INDEX_DIR:-.cache/codemap}/${PROJ}.json"
    IDX_SCANNED_AT=$(grep -o '"scanned_at"[[:space:]]*:[[:space:]]*"[^"]*"' "$_IDX" 2>/dev/null | head -1 | sed 's/.*"\([^"]*\)"$/\1/')
    {
        echo ""
        echo "## Test Impact (codemap-py)"
        echo "<!-- reused by /develop:fix Step 3 when index_scanned_at still matches the live index and stale != true -->"
        echo "- index_scanned_at: ${IDX_SCANNED_AT:-unknown}"
        echo '```json'
        cat "$TI_FILE"
        echo '```'
    } >> "$DIAG_FILE"
fi

Hand off: -> /develop:fix --diagnosis $DIAG_FILE. Root cause already known — fix's Step 1 analysis complete.

Worktree exit — if WORKTREE_ENABLED=true: the diagnosis file already lives in the main tree (§Deliverable). Follow worktree-isolation.md §Exit — capture branch, call ExitWorktree(action="keep"), append the Worktree block to the report. The follow-up /develop:fix then runs in the main tree against the main-tree $DIAG_FILE. Never auto-merge.

Final Report

After root cause confirmed and handoff to /develop:fix complete, emit terminal summary:

Root Cause: <one sentence>
File(s): <suspect files>
Evidence: <key signals>
→ Handed off to /develop:fix --diagnosis $DIAG_FILE

## Confidence
**Score**: 0.N — [high ≥0.9 | moderate 0.85–0.9 | low <0.85 ⚠]
**Gaps**:
- [e.g., unverified alternative hypotheses, hypothesis only — not confirmed via test reproduction]

**Refinements**: N passes.

Next step — print as plain text, not a selectable prompt (this skill has disable-model-invocation: true and no Skill tool in allowed-tools, so /develop:fix cannot be invoked automatically here). Substitute the resolved $DIAG_FILE path: -> /develop:fix --diagnosis $DIAG_FILE (e.g. /develop:fix --diagnosis .plans/active/debug_<slug>.md) for the user to copy-paste.

export CSID="${CLAUDE_CODE_SESSION_ID:-$PPID}"
rm -f .temp/state/skill-contract.md ${TMPDIR:-/tmp}/dev-debug-hypotheses-${CSID}  # clear contract + ledger — skill complete (compaction-contract.md §Lifecycle)  # timeout: 5000

Anti-Rationalizations